Version 5.4
Mus musculus Protein: Col6a6
Summary
InnateDB Protein IDBP-195502.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Col6a6
Protein Name collagen, type VI, alpha 6
Synonyms
Species Mus musculus
Ensembl Protein ENSMUSP00000096040
InnateDB Gene IDBG-195520 (Col6a6)
Protein Structure
UniProt Annotation
Function Collagen VI acts as a cell-binding protein. {ECO:0000250}.
Subcellular Localization Secreted, extracellular space, extracellular matrix {ECO:0000269PubMed:18276594}. Note=Deposed in the extracellular matrix of skeletal muscle.
Disease Associations
Tissue Specificity In newborn, it is expressed in lung, heart, kidney, muscle, brain, intestine, skin, femur and sternum. In adult, it is expressed in lung, heart, muscle, ovary, brain, liver and sternum. {ECO:0000269PubMed:18276594}.
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
Biological Process
GO:0007155 cell adhesion
Cellular Component
GO:0005578 proteinaceous extracellular matrix
GO:0005581 collagen trimer
GO:0031012 extracellular matrix
Protein Structure and Domains
PDB ID MGI:2444259
InterPro IPR002035 von Willebrand factor, type A
IPR008160 Collagen triple helix repeat
PFAM PF00092
PF01391
PRINTS
PIRSF
SMART SM00327
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q8C6K9
PhosphoSite PhosphoSite-Q8C6K9
TrEMBL
UniProt Splice Variant
Entrez Gene 245026
UniGene Mm.482507
RefSeq NP_001096077
MGI ID
MGI Symbol Col6a6
OMIM
CCDS CCDS52906
HPRD
IMGT
EMBL AK054356 AM748259 AM748260 AM748261 AM748262
GenPept BAC35749 CAO01894 CAO01895 CAO01896 CAO01897

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca