Version 5.4
Mus musculus Gene: Slc13a5
Summary
InnateDB Gene IDBG-196438.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Slc13a5
Gene Name solute carrier family 13 (sodium-dependent citrate transporter), member 5
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000020805
Encoded Proteins
IDBP-196440
solute carrier family 13 (sodium-dependent citrate transporter), member 5
IDBP-533687
solute carrier family 13 (sodium-dependent citrate transporter), member 5
IDBP-541451
solute carrier family 13 (sodium-dependent citrate transporter), member 5
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000141485:
SLC13A5 is a tricarboxylate plasma transporter with a preference for citrate.[supplied by OMIM, Apr 2004]
Gene Information
Type Protein coding
Genomic Location Chromosome 11:72241994-72267222
Strand Reverse strand
Band B4
Transcripts
ENSMUST00000021161 ENSMUSP00000021161
ENSMUST00000140167 ENSMUSP00000119822
ENSMUST00000137701 ENSMUSP00000119417
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
GO:0005215 transporter activity
GO:0005343 organic acid:sodium symporter activity
GO:0015137 citrate transmembrane transporter activity
GO:0015141 succinate transmembrane transporter activity
GO:0015142 tricarboxylic acid transmembrane transporter activity
GO:0017153 sodium:dicarboxylate symporter activity
Biological Process
GO:0006814 sodium ion transport
GO:0006842 tricarboxylic acid transport
GO:0015744 succinate transport
GO:0015746 citrate transport
GO:0035674 tricarboxylic acid transmembrane transport
GO:0055085 transmembrane transport
GO:0071422 succinate transmembrane transport
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0016323 basolateral plasma membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000141485
View Gene Order
ENSBTAG00000004680
Not yet available
Pathways
NETPATH
REACTOME
REACT_217615
Transport of glucose and other sugars, bile salts and organic acids, metal ions and amine compounds pathway
REACT_247550
SLC-mediated transmembrane transport pathway
REACT_256568
Sodium-coupled sulphate, di- and tri-carboxylate transporters pathway
REACT_253400
Transmembrane transport of small molecules pathway
KEGG
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_20646
Sodium-coupled sulphate, di- and tri-carboxylate transporters pathway
REACT_19305
Transport of glucose and other sugars, bile salts and organic acids, metal ions and amine compounds pathway
REACT_15518
Transmembrane transport of small molecules pathway
REACT_19118
SLC-mediated transmembrane transport pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL Q5NBV0
UniProt Splice Variant
Entrez Gene 237831
UniGene Mm.340778
RefSeq NM_001004148 XM_006533221
OMIM
CCDS CCDS24983
HPRD
IMGT
MGI ID MGI:3037150
MGI Symbol Slc13a5
EMBL AL929071
GenPept
RNA Seq Atlas 237831

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca