Version 5.4
Mus musculus Gene: Rab5b
Summary
InnateDB Gene IDBG-198109.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rab5b
Gene Name RAB5B, member RAS oncogene family
Synonyms C030027M18Rik
Species Mus musculus
Ensembl Gene ENSMUSG00000000711
Encoded Proteins
IDBP-198111
RAB5B, member RAS oncogene family
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000111540:
Gene Information
Type Protein coding
Genomic Location Chromosome 10:128677193-128696268
Strand Reverse strand
Band D3
Transcripts
ENSMUST00000000727 ENSMUSP00000000727
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
They are also associated with 25 interaction(s) predicted by orthology.
Experimentally validated
Total 5 [view]
Protein-Protein 4 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 1 [view]
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 25 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003924 GTPase activity
GO:0005515 protein binding
GO:0005525 GTP binding
GO:0019003 GDP binding
GO:0030742 GTP-dependent protein binding
Biological Process
GO:0006184 GTP catabolic process
GO:0006886 intracellular protein transport
GO:0006913 nucleocytoplasmic transport
GO:0007032 endosome organization
GO:0007165 signal transduction
GO:0007264 small GTPase mediated signal transduction
GO:0015031 protein transport
GO:0019882 antigen processing and presentation
GO:0030100 regulation of endocytosis
Cellular Component
GO:0005622 intracellular
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005768 endosome
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0030139 endocytic vesicle
GO:0031901 early endosome membrane
GO:0042470 melanosome
GO:0070062 extracellular vesicular exosome
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000111540
View Gene Order
ENSBTAG00000014129
Not yet available
Pathways
NETPATH
REACTOME
KEGG
mmu04144
Endocytosis pathway
mmu04962
Vasopressin-regulated water reabsorption pathway
mmu05146
Amoebiasis pathway
mmu04145
Phagosome pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
hsa04144
Endocytosis pathway
hsa04962
Vasopressin-regulated water reabsorption pathway
hsa05146
Amoebiasis pathway
hsa04145
Phagosome pathway
INOH
PID NCI
Cross-References
SwissProt P61021
TrEMBL B2RPS1 Q0PD56
UniProt Splice Variant
Entrez Gene 19344
UniGene Mm.12815 Mm.471965 Mm.490984
RefSeq NM_177411 XM_006513384
OMIM
CCDS CCDS24287
HPRD
IMGT
MGI ID MGI:105938
MGI Symbol Rab5b
EMBL AB232594 AK081251 BC137574 BC137575 CH466578 M79311 X84239
GenPept AAI37575 AAI37576 AAK14835 BAC38176 BAF02856 CAA59016 EDL24597
RNA Seq Atlas 19344

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca