Version 5.4
Mus musculus Gene: Rab38
Summary
InnateDB Gene IDBG-198227.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rab38
Gene Name RAB38, member of RAS oncogene family
Synonyms 2310011F14Rik; AU043391; cht
Species Mus musculus
Ensembl Gene ENSMUSG00000030559
Encoded Proteins
IDBP-267067
RAB38, member of RAS oncogene family
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000123892:
Gene Information
Type Protein coding
Genomic Location Chromosome 7:88430273-88491466
Strand Forward strand
Band D3
Transcripts
ENSMUST00000107256 ENSMUSP00000102877
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 10 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Experimentally validated
Total 10 [view]
Protein-Protein 10 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003924 GTPase activity
GO:0005515 protein binding
GO:0005525 GTP binding
GO:0030742 GTP-dependent protein binding
GO:0032403 protein complex binding
GO:0035650 AP-1 adaptor complex binding
GO:0035651 AP-3 adaptor complex binding
Biological Process
GO:0006184 GTP catabolic process
GO:0006886 intracellular protein transport
GO:0006913 nucleocytoplasmic transport
GO:0006996 organelle organization
GO:0007165 signal transduction
GO:0007264 small GTPase mediated signal transduction
GO:0015031 protein transport
GO:0032438 melanosome organization
GO:0035646 endosome to melanosome transport
GO:0060155 platelet dense granule organization
GO:0072657 protein localization to membrane
GO:0090383 phagosome acidification
Cellular Component
GO:0005622 intracellular
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005769 early endosome
GO:0005783 endoplasmic reticulum
GO:0005794 Golgi apparatus
GO:0005829 cytosol
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0030670 phagocytic vesicle membrane
GO:0031982 vesicle
GO:0042470 melanosome
GO:0045335 phagocytic vesicle
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000123892
View Gene Order
ENSBTAG00000015793
Not yet available
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
INOH
PID NCI
deltanp63pathway
Validated transcriptional targets of deltaNp63 isoforms
Cross-References
SwissProt Q8QZZ8
TrEMBL Q5FW76
UniProt Splice Variant
Entrez Gene 72433
UniGene Mm.276669 Mm.474837
RefSeq NM_028238
OMIM
CCDS CCDS21439
HPRD
IMGT
MGI ID MGI:1919683
MGI Symbol Rab38
EMBL AB232634 AF448441 AF448442 AF448443 AK009296 AK044783 AK054253 AK165682 AY062237 BC089578 CH466543
GenPept AAH89578 AAL38663 AAM12528 BAB26198 BAC32089 BAC35704 BAE38335 BAF02896 EDL06793
RNA Seq Atlas 72433

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca