Version 5.4
Mus musculus Gene: Tsr1
Summary
InnateDB Gene IDBG-199301.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Tsr1
Gene Name TSR1, 20S rRNA accumulation, homolog (yeast)
Synonyms AU040765; AW550801; mKIAA1401
Species Mus musculus
Ensembl Gene ENSMUSG00000038335
Encoded Proteins
IDBP-199303
TSR1, 20S rRNA accumulation, homolog (yeast)
IDBP-534031
TSR1, 20S rRNA accumulation, homolog (yeast)
IDBP-533171
TSR1, 20S rRNA accumulation, homolog (yeast)
IDBP-534637
TSR1, 20S rRNA accumulation, homolog (yeast)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000167721:
Gene Information
Type Protein coding
Genomic Location Chromosome 11:74898071-74909342
Strand Forward strand
Band B5
Transcripts
ENSMUST00000045807 ENSMUSP00000039027
ENSMUST00000155702 ENSMUSP00000119868
ENSMUST00000155785
ENSMUST00000128230 ENSMUSP00000121384
ENSMUST00000144019
ENSMUST00000153316 ENSMUSP00000114183
ENSMUST00000130910
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 38 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 38 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0044822 poly(A) RNA binding
Biological Process
GO:0008150 biological_process
GO:0042254 ribosome biogenesis
GO:0042255 ribosome assembly
Cellular Component
GO:0005575 cellular_component
GO:0005634 nucleus
GO:0005730 nucleolus
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000167721
View Gene Order
ENSBTAG00000004225
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.220843
RefSeq NM_177325
OMIM
CCDS CCDS36225
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca