Version 5.4
Mus musculus Gene: Ccdc55
Summary
InnateDB Gene IDBG-201333.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Ccdc55
Gene Name coiled-coil domain containing 55
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000037958
Encoded Proteins
IDBP-201335
coiled-coil domain containing 55
IDBP-539961
coiled-coil domain containing 55
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000126653:
Gene Information
Type Protein coding
Genomic Location Chromosome 11:77044292-77078435
Strand Reverse strand
Band B5
Transcripts
ENSMUST00000102494 ENSMUSP00000099552
ENSMUST00000127758 ENSMUSP00000118119
ENSMUST00000134685
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 9 interaction(s) predicted by orthology.
Predicted by orthology
Total 9 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003729 mRNA binding
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0000381 regulation of alternative mRNA splicing, via spliceosome
GO:0006397 mRNA processing
GO:0006913 nucleocytoplasmic transport
GO:0008380 RNA splicing
GO:0032502 developmental process
Cellular Component
GO:0005634 nucleus
GO:0016607 nuclear speck
GO:0030529 ribonucleoprotein complex
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000126653
View Gene Order
ENSBTAG00000019341
Not yet available
Cross-References
SwissProt
TrEMBL Q5NCR8
UniProt Splice Variant
Entrez Gene 237859
UniGene Mm.156195
RefSeq NM_001012309
OMIM
CCDS CCDS25075
HPRD
IMGT
MGI ID MGI:2144305
MGI Symbol Ccdc55
EMBL AL603842
GenPept
RNA Seq Atlas 237859

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca