Version 5.4
Mus musculus Gene: Gtf2ird2
Summary
InnateDB Gene IDBG-202562.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Gtf2ird2
Gene Name GTF2I repeat domain containing 2
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000015942
Encoded Proteins
IDBP-202564
GTF2I repeat domain containing 2
IDBP-543041
GTF2I repeat domain containing 2
IDBP-543042
GTF2I repeat domain containing 2
IDBP-543043
GTF2I repeat domain containing 2
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000174428:
This gene encodes a glycosylated phosphoprotein with a leucine zipper motif, two helix-loop-helix motifs (I repeats) that are similar to domains found in the TFII-I family of transcription factors, one CHARLIE8 transposable element-like sequence, and a BED zinc finger. This gene lies within a region that is deleted in Williams-Beuren syndrome. Alternatively spliced variants which encode different protein isoforms have been described; however, not all variants have been fully characterized. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 5:134184019-134224355
Strand Forward strand
Band G2
Transcripts
ENSMUST00000016086 ENSMUSP00000016086
ENSMUST00000123941 ENSMUSP00000120792
ENSMUST00000128842
ENSMUST00000135588 ENSMUSP00000120962
ENSMUST00000152587 ENSMUSP00000122822
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0005515 protein binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0014883 transition between fast and slow fiber
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000174428
View Gene Order
ENSBTAG00000026286
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.218744
RefSeq NM_053266 XM_006504343 XM_006504345
OMIM
CCDS CCDS19719
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca