Version 5.4
Homo sapiens Gene: GTF2IRD2B
Summary
InnateDB Gene IDBG-21893.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol GTF2IRD2B
Gene Name GTF2I repeat domain containing 2B
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000174428
Encoded Proteins
IDBP-379270
GTF2I repeat domain containing 2B
IDBP-807076
GTF2I repeat domain containing 2B
IDBP-807078
GTF2I repeat domain containing 2B
IDBP-807080
GTF2I repeat domain containing 2B
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes a glycosylated phosphoprotein with a leucine zipper motif, two helix-loop-helix motifs (I repeats) that are similar to domains found in the TFII-I family of transcription factors, one CHARLIE8 transposable element-like sequence, and a BED zinc finger. This gene lies within a region that is deleted in Williams-Beuren syndrome. Alternatively spliced variants which encode different protein isoforms have been described; however, not all variants have been fully characterized. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 7:75092573-75149817
Strand Forward strand
Band q11.23
Transcripts
ENST00000394939
ENST00000418185 ENSP00000411454
ENST00000472837 ENSP00000480524
ENST00000478628
ENST00000613786
ENST00000620662
ENST00000619142 ENSP00000480037
ENST00000614064 ENSP00000481706
ENST00000617708
ENST00000611835
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000015942
View Gene Order
ENSBTAG00000026286
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene
RefSeq NM_001003795 XM_005277579 XM_005277581 NM_001281447 NM_173537 XM_005277612
HUGO
OMIM
CCDS CCDS34659 CCDS5576 CCDS64682
HPRD
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca