Version 5.4
Mus musculus Gene: Tefm
Summary
InnateDB Gene IDBG-203950.7
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Tefm
Gene Name transcription elongation factor, mitochondrial
Synonyms 1110002N22Rik
Species Mus musculus
Ensembl Gene ENSMUSG00000046909
Encoded Proteins
IDBP-203952
RIKEN cDNA 1110002N22 gene
IDBP-533298
RIKEN cDNA 1110002N22 gene
IDBP-535796
RIKEN cDNA 1110002N22 gene
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000172171:
Gene Information
Type Protein coding
Genomic Location Chromosome 11:80136678-80142175
Strand Reverse strand
Band B5
Transcripts
ENSMUST00000050207 ENSMUSP00000059304
ENSMUST00000136996 ENSMUSP00000122596
ENSMUST00000131601 ENSMUSP00000114770
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 5 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 0
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 5 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0005515 protein binding
GO:0030337 DNA polymerase processivity factor activity
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006119 oxidative phosphorylation
GO:0006259 DNA metabolic process
GO:0006355 regulation of transcription, DNA-templated
GO:0006390 transcription from mitochondrial promoter
Cellular Component
GO:0005739 mitochondrion
GO:0005759 mitochondrial matrix
GO:0030529 ribonucleoprotein complex
GO:0042645 mitochondrial nucleoid
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000172171
View Gene Order
ENSBTAG00000018386
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.18466 Mm.402183 Mm.442198
RefSeq NM_183275 XM_006534060 XM_006534061
OMIM
CCDS CCDS36241
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca