Version 5.4
Mus musculus Gene: Rpsa
Summary
InnateDB Gene IDBG-205053.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rpsa
Gene Name ribosomal protein SA
Synonyms 67kDa; 67lr; AL022858; Lamr; Lamr1; Lamrl1; MLR; P40; P40-3; P40-8
Species Mus musculus
Ensembl Gene ENSMUSG00000032518
Encoded Proteins
IDBP-205055
ribosomal protein SA
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 9:120127766-120132369
Strand Forward strand
Band F4
Transcripts
ENSMUST00000035105 ENSMUSP00000035105
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 20 experimentally validated interaction(s) in this database.
Experimentally validated
Total 20 [view]
Protein-Protein 20 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003735 structural constituent of ribosome
GO:0005055 laminin receptor activity
GO:0043236 laminin binding
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0000447 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000461 endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0006407 rRNA export from nucleus
GO:0006412 translation
GO:0007155 cell adhesion
Cellular Component
GO:0005622 intracellular
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0005886 plasma membrane
GO:0015935 small ribosomal subunit
GO:0016020 membrane
GO:0022627 cytosolic small ribosomal subunit
GO:0030686 90S preribosome
Orthologs
No orthologs found for this gene
Pathways
NETPATH
REACTOME
KEGG
mmu03010
Ribosome pathway
INOH
PID NCI
Cross-References
SwissProt P14206
TrEMBL
UniProt Splice Variant
Entrez Gene 16785
UniGene Mm.336551 Mm.380580 Mm.4071 Mm.432382
RefSeq NM_011029 XM_006543473 XM_006544175
OMIM
CCDS CCDS23623
HPRD
IMGT
MGI ID MGI:105381
MGI Symbol Rpsa
EMBL AF140348 AK010423 AK010985 AK011041 AK011043 AK075778 AK075790 AK082935 AK088954 AK134224 AK135488 AK160551 AK160625 AK165219 AK166697 AK166874 AK167132 BC003829 BC037195 BC055886 BC081461 BC084677 BC092041 BC094902 BC099601 BC110285 DQ360291 DQ360292 J02870 X06406
GenPept AAA39413 AAD26866 AAH03829 AAH37195 AAH55886 AAH81461 AAH84677 AAH92041 AAH94902 AAH99601 AAI10286 ABC95972 ABC95977 BAB26926 BAB27306 BAB27353 BAB27355 BAC35952 BAC35960 BAC38701 BAC40671 BAE22057 BAE22550 BAE35867 BAE35924 BAE38083 BAE38953 BAE39085 BAE39278 CAA29696
RNA Seq Atlas 102641427 102642689 16785

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca