Version 5.4
Mus musculus Gene: Slc6a20b
Summary
InnateDB Gene IDBG-206365.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Slc6a20b
Gene Name solute carrier family 6 (neurotransmitter transporter), member 20B
Synonyms AA986306; Sit1; Slc6a20; XT3; Xtrp3
Species Mus musculus
Ensembl Gene ENSMUSG00000025243
Encoded Proteins
IDBP-206367
solute carrier family 6 (neurotransmitter transporter), member 20B
IDBP-622267
solute carrier family 6 (neurotransmitter transporter), member 20B
IDBP-622269
solute carrier family 6 (neurotransmitter transporter), member 20B
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 9:123593820-123632565
Strand Reverse strand
Band F4
Transcripts
ENSMUST00000026273 ENSMUSP00000026273
ENSMUST00000166800
ENSMUST00000171122
ENSMUST00000168824 ENSMUSP00000129307
ENSMUST00000163397 ENSMUSP00000127422
ENSMUST00000164241
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005215 transporter activity
GO:0005328 neurotransmitter:sodium symporter activity
GO:0005515 protein binding
Biological Process
GO:0006810 transport
GO:0006836 neurotransmitter transport
GO:0055085 transmembrane transport
Cellular Component
GO:0005886 plasma membrane
GO:0005887 integral component of plasma membrane
GO:0016021 integral component of membrane
GO:0016324 apical plasma membrane
GO:0031526 brush border membrane
Orthologs
No orthologs found for this gene
Pathways
NETPATH
REACTOME
REACT_217615
Transport of glucose and other sugars, bile salts and organic acids, metal ions and amine compounds pathway
REACT_247550
SLC-mediated transmembrane transport pathway
REACT_251788
Transport of inorganic cations/anions and amino acids/oligopeptides pathway
REACT_253228
Na+/Cl- dependent neurotransmitter transporters pathway
REACT_253400
Transmembrane transport of small molecules pathway
REACT_230460
Amino acid transport across the plasma membrane pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene 22599
UniGene Mm.407129 Mm.41963
RefSeq NM_011731
OMIM
CCDS CCDS23661
HPRD
IMGT
MGI ID MGI:1336891
MGI Symbol Slc6a20b
EMBL
GenPept
RNA Seq Atlas 22599

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca