Version 5.4
Mus musculus Gene: Gpcpd1
Summary
InnateDB Gene IDBG-207387.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Gpcpd1
Gene Name glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
Synonyms 2310004G06Rik; 2310032D16Rik; AU015213; Gde5; mKIAA1434; Prei4
Species Mus musculus
Ensembl Gene ENSMUSG00000027346
Encoded Proteins
IDBP-207391
glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
IDBP-207393
glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
IDBP-260869
glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
IDBP-260873
glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
IDBP-260875
glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
IDBP-540758
glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
IDBP-540757
glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
IDBP-539875
glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
IDBP-532325
glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
IDBP-540741
glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000125772:
Gene Information
Type Protein coding
Genomic Location Chromosome 2:132529082-132587729
Strand Reverse strand
Band F2
Transcripts
ENSMUST00000060955 ENSMUSP00000062221
ENSMUST00000028822 ENSMUSP00000028822
ENSMUST00000110142 ENSMUSP00000105769
ENSMUST00000110136 ENSMUSP00000105763
ENSMUST00000110135 ENSMUSP00000105762
ENSMUST00000145694 ENSMUSP00000116457
ENSMUST00000149854 ENSMUSP00000116949
ENSMUST00000148833 ENSMUSP00000116156
ENSMUST00000127712
ENSMUST00000124632 ENSMUSP00000117217
ENSMUST00000124107 ENSMUSP00000122751
ENSMUST00000140867
ENSMUST00000131617
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0008081 phosphoric diester hydrolase activity
GO:0008889 glycerophosphodiester phosphodiesterase activity
GO:0030246 carbohydrate binding
GO:0047389 glycerophosphocholine phosphodiesterase activity
GO:2001070 starch binding
Biological Process
GO:0006071 glycerol metabolic process
GO:0006629 lipid metabolic process
Cellular Component
GO:0005829 cytosol
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000125772
View Gene Order
ENSBTAG00000008293
Not yet available
Pathways
NETPATH
REACTOME
REACT_199037
Hydrolysis of LPE pathway
REACT_199022
Hydrolysis of LPC pathway
REACT_188937
Metabolism pathway
REACT_232291
Metabolism of lipids and lipoproteins pathway
REACT_188641
Glycerophospholipid biosynthesis pathway
REACT_188643
Phospholipid metabolism pathway
KEGG
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_120785
Hydrolysis of LPE pathway
REACT_120977
Hydrolysis of LPC pathway
REACT_22258
Metabolism of lipids and lipoproteins pathway
REACT_121401
Glycerophospholipid biosynthesis pathway
REACT_120870
Phospholipid metabolism pathway
REACT_111217
Metabolism pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL B0R058
UniProt Splice Variant
Entrez Gene 74182
UniGene Mm.211211 Mm.416382
RefSeq NM_001042671 NM_001042672 NM_001291050 NM_001291051 NM_001291052 NM_027096 NM_028802 XM_006500274 XM_006500275 XM_006500276 XM_006500277 XM_006500278 XM_006500279 XM_006500280 XM_006500282 XM_006500283 XM_006500284 XM_006500285
OMIM
CCDS CCDS38246 CCDS71151
HPRD
IMGT
MGI ID MGI:104898
MGI Symbol Gpcpd1
EMBL AL807386
GenPept
RNA Seq Atlas 74182

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca