Version 5.4
Mus musculus Gene: Luc7l3
Summary
InnateDB Gene IDBG-208822.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Luc7l3
Gene Name LUC7-like 3 (S. cerevisiae)
Synonyms 3300001P08Rik; Luc7a
Species Mus musculus
Ensembl Gene ENSMUSG00000020863
Encoded Proteins
IDBP-208824
LUC7-like 3 (S. cerevisiae)
IDBP-265854
LUC7-like 3 (S. cerevisiae)
IDBP-265856
LUC7-like 3 (S. cerevisiae)
IDBP-265858
LUC7-like 3 (S. cerevisiae)
IDBP-621937
LUC7-like 3 (S. cerevisiae)
IDBP-621939
LUC7-like 3 (S. cerevisiae)
IDBP-621935
LUC7-like 3 (S. cerevisiae)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000108848:
This gene encodes a protein with an N-terminal half that contains cysteine/histidine motifs and leucine zipper-like repeats, and the C-terminal half is rich in arginine and glutamate residues (RE domain) and arginine and serine residues (RS domain). This protein localizes with a speckled pattern in the nucleus, and could be involved in the formation of splicesome via the RE and RS domains. Two alternatively spliced transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Aug 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome 11:94287890-94321988
Strand Reverse strand
Band D
Transcripts
ENSMUST00000021226 ENSMUSP00000021226
ENSMUST00000107822 ENSMUSP00000103452
ENSMUST00000107821 ENSMUSP00000103451
ENSMUST00000107820 ENSMUSP00000103450
ENSMUST00000132623 ENSMUSP00000131166
ENSMUST00000138369 ENSMUSP00000128571
ENSMUST00000135311
ENSMUST00000166312 ENSMUSP00000129919
ENSMUST00000171033
ENSMUST00000165620
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 7 experimentally validated interaction(s) in this database.
They are also associated with 31 interaction(s) predicted by orthology.
Experimentally validated
Total 7 [view]
Protein-Protein 7 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 31 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003729 mRNA binding
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006376 mRNA splice site selection
GO:0008380 RNA splicing
Cellular Component
GO:0005634 nucleus
GO:0005685 U1 snRNP
GO:0005886 plasma membrane
GO:0005925 focal adhesion
GO:0016607 nuclear speck
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000108848
View Gene Order
ENSBTAG00000002279
Not yet available
Cross-References
SwissProt Q5SUF2
TrEMBL
UniProt Splice Variant
Entrez Gene 67684
UniGene Mm.30927 Mm.393094 Mm.397729 Mm.486381
RefSeq XM_006534011 NM_026313 XM_006534010 XM_006534012
OMIM
CCDS CCDS25252
HPRD
IMGT
MGI ID MGI:1914934
MGI Symbol Luc7l3
EMBL AK014362 AK019464 AK084714 AK151228 AK151839 AL645846 AL645965 BC009092
GenPept AAH09092 BAB29297 BAB31736 BAC39261 BAE30220 BAE30732 CAI24700 CAI24701 CAI25943 CAI25944
RNA Seq Atlas 67684

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca