Version 5.4
Mus musculus Gene: Pabpc1l
Summary
InnateDB Gene IDBG-212010.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Pabpc1l
Gene Name poly(A) binding protein, cytoplasmic 1-like
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000054582
Encoded Proteins
IDBP-212012
poly(A) binding protein, cytoplasmic 1-like
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000101104:
Gene Information
Type Protein coding
Genomic Location Chromosome 2:164025450-164050538
Strand Forward strand
Band H3
Transcripts
ENSMUST00000067715 ENSMUSP00000096701
ENSMUST00000141671
ENSMUST00000156087
ENSMUST00000126272
ENSMUST00000150523
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003674 molecular_function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
Biological Process
GO:0001556 oocyte maturation
GO:0006378 mRNA polyadenylation
Cellular Component
GO:0005575 cellular_component
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000101104
View Gene Order
ENSBTAG00000016849
Not yet available
Pathways
NETPATH
REACTOME
KEGG
mmu03018
RNA degradation pathway
mmu03013
RNA transport pathway
mmu03015
mRNA surveillance pathway pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
hsa03018
RNA degradation pathway
hsa03013
RNA transport pathway
hsa03015
mRNA surveillance pathway pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.82301
RefSeq NM_001114079 XM_006499828
OMIM
CCDS CCDS50792
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca