Version 5.4
Homo sapiens Gene: PABPC1L
Summary
InnateDB Gene IDBG-77009.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol PABPC1L
Gene Name poly(A) binding protein, cytoplasmic 1-like
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000101104
Encoded Proteins
IDBP-77011
poly(A) binding protein, cytoplasmic 1-like
IDBP-77013
poly(A) binding protein, cytoplasmic 1-like
IDBP-77015
poly(A) binding protein, cytoplasmic 1-like
IDBP-77017
poly(A) binding protein, cytoplasmic 1-like
IDBP-77019
poly(A) binding protein, cytoplasmic 1-like
IDBP-77021
poly(A) binding protein, cytoplasmic 1-like
IDBP-77025
poly(A) binding protein, cytoplasmic 1-like
IDBP-77027
poly(A) binding protein, cytoplasmic 1-like
IDBP-596271
poly(A) binding protein, cytoplasmic 1-like
IDBP-590500
poly(A) binding protein, cytoplasmic 1-like
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 20:44910062-44959035
Strand Forward strand
Band q13.12
Transcripts
ENST00000217074 ENSP00000217074
ENST00000255136 ENSP00000255136
ENST00000217073 ENSP00000217073
ENST00000372826 ENSP00000361913
ENST00000372824 ENSP00000361911
ENST00000372822 ENSP00000361909
ENST00000372819 ENSP00000361906
ENST00000217075 ENSP00000217075
ENST00000481196
ENST00000490798
ENST00000476056
ENST00000479873 ENSP00000432620
ENST00000465761
ENST00000474208
ENST00000489068
ENST00000482486
ENST00000537323 ENSP00000445661
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
Experimentally validated
Total 3 [view]
Protein-Protein 3 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
Biological Process
GO:0001556 oocyte maturation
GO:0006378 mRNA polyadenylation
Cellular Component
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000054582
View Gene Order
ENSBTAG00000016849
Not yet available
Pathways
NETPATH
REACTOME
KEGG
hsa03018
RNA degradation pathway
hsa03013
RNA transport pathway
hsa03015
mRNA surveillance pathway pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.641481
RefSeq NM_001124756 XM_005260561 XM_006723877
HUGO
OMIM
CCDS CCDS42878
HPRD
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca