Version 5.4
Mus musculus Gene: Abca8a
Summary
InnateDB Gene IDBG-213891.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Abca8a
Gene Name ATP-binding cassette, sub-family A (ABC1), member 8a
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000041828
Encoded Proteins
IDBP-213893
ATP-binding cassette, sub-family A (ABC1), member 8a
IDBP-213895
ATP-binding cassette, sub-family A (ABC1), member 8a
IDBP-268298
ATP-binding cassette, sub-family A (ABC1), member 8a
IDBP-268300
ATP-binding cassette, sub-family A (ABC1), member 8a
IDBP-538429
ATP-binding cassette, sub-family A (ABC1), member 8a
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 11:110025634-110095978
Strand Reverse strand
Band E1
Transcripts
ENSMUST00000046223 ENSMUSP00000045808
ENSMUST00000100287 ENSMUSP00000097860
ENSMUST00000106664 ENSMUSP00000102275
ENSMUST00000106662 ENSMUSP00000102273
ENSMUST00000141279
ENSMUST00000154849
ENSMUST00000129810
ENSMUST00000146635 ENSMUSP00000114393
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003924 GTPase activity
GO:0005524 ATP binding
GO:0005525 GTP binding
GO:0016887 ATPase activity
GO:0017111 nucleoside-triphosphatase activity
Biological Process
GO:0006200 ATP catabolic process
GO:0006810 transport
GO:0008150 biological_process
Cellular Component
GO:0005575 cellular_component
GO:0005886 plasma membrane
GO:0016021 integral component of membrane
Orthologs
No orthologs found for this gene
Pathways
NETPATH
REACTOME
REACT_253400
Transmembrane transport of small molecules pathway
REACT_237882
ABC-family proteins mediated transport pathway
KEGG
mmu02010
ABC transporters pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.344148
RefSeq NM_153145 XM_006533061 XM_006533062 XM_006533063
OMIM
CCDS CCDS48974
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca