Version 5.4
Mus musculus Gene: Phyhd1
Summary
InnateDB Gene IDBG-253434.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Phyhd1
Gene Name phytanoyl-CoA dioxygenase domain containing 1
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000079484
Encoded Proteins
IDBP-155890
phytanoyl-CoA dioxygenase domain containing 1
IDBP-253442
phytanoyl-CoA dioxygenase domain containing 1
IDBP-253444
phytanoyl-CoA dioxygenase domain containing 1
IDBP-540270
phytanoyl-CoA dioxygenase domain containing 1
IDBP-539189
phytanoyl-CoA dioxygenase domain containing 1
IDBP-534099
phytanoyl-CoA dioxygenase domain containing 1
IDBP-538993
phytanoyl-CoA dioxygenase domain containing 1
IDBP-541860
phytanoyl-CoA dioxygenase domain containing 1
IDBP-542095
phytanoyl-CoA dioxygenase domain containing 1
IDBP-533054
phytanoyl-CoA dioxygenase domain containing 1
IDBP-533193
phytanoyl-CoA dioxygenase domain containing 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000175287:
Gene Information
Type Protein coding
Genomic Location Chromosome 2:30266203-30282149
Strand Forward strand
Band B
Transcripts
ENSMUST00000085290
ENSMUST00000091132 ENSMUSP00000088663
ENSMUST00000113645 ENSMUSP00000109275
ENSMUST00000113643 ENSMUSP00000109273
ENSMUST00000154647 ENSMUSP00000121371
ENSMUST00000133877 ENSMUSP00000117643
ENSMUST00000139719 ENSMUSP00000116450
ENSMUST00000150695 ENSMUSP00000121995
ENSMUST00000127689 ENSMUSP00000119543
ENSMUST00000138254 ENSMUSP00000116062
ENSMUST00000147204 ENSMUSP00000122095
ENSMUST00000129512
ENSMUST00000154988
ENSMUST00000143119 ENSMUSP00000125607
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0046872 metal ion binding
GO:0051213 dioxygenase activity
Biological Process
GO:0008150 biological_process
GO:0055114 oxidation-reduction process
Cellular Component
GO:0005575 cellular_component
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000175287
View Gene Order
ENSBTAG00000038831
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.297949
RefSeq NM_001252568 NM_001252570 NM_001252571 NM_001281829 NM_172267
OMIM
CCDS CCDS15876 CCDS57163 CCDS57164
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca