Version 5.4
Mus musculus Protein: Phyhd1
Summary
InnateDB Protein IDBP-155890.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Phyhd1
Protein Name phytanoyl-CoA dioxygenase domain containing 1
Synonyms
Species Mus musculus
Ensembl Protein ENSMUSP00000088663
InnateDB Gene IDBG-253434 (Phyhd1)
Protein Structure
UniProt Annotation
Function Has alpha-ketoglutarate-dependent dioxygenase activity. Does not show detectable activity towards fatty acid CoA thioesters. Is not expected to be active with phytanoyl CoA (By similarity). {ECO:0000250}.
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0046872 metal ion binding
GO:0051213 dioxygenase activity
Biological Process
GO:0008150 biological_process
GO:0055114 oxidation-reduction process
Cellular Component
GO:0005575 cellular_component
Protein Structure and Domains
PDB ID MGI:3612860
InterPro IPR008775 Phytanoyl-CoA dioxygenase
PFAM PF05721
PRINTS
PIRSF
SMART
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q9DB26
PhosphoSite PhosphoSite-Q9DB26
TrEMBL B7ZNN8
UniProt Splice Variant
Entrez Gene 227696
UniGene Mm.297949
RefSeq NP_758471
MGI ID
MGI Symbol Phyhd1
OMIM
CCDS CCDS15876
HPRD
IMGT
EMBL AK005293 AK138607 AL845258 AL954388 BC039982 BC132271 BC132273 BC145356
GenPept AAH39982 AAI32272 AAI32274 AAI45357 BAB23937 BAE23715 CAM20569 CAM20572 CAM23174 CAM23177

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca