Version 5.4
Homo sapiens Gene: ALKBH4
Summary
InnateDB Gene IDBG-33587.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol ALKBH4
Gene Name alkB, alkylation repair homolog 4 (E. coli)
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000160993
Encoded Proteins
IDBP-33589
alkB, alkylation repair homolog 4 (E. coli)
IDBP-478947
alkB, alkylation repair homolog 4 (E. coli)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 7:102456238-102464876
Strand Reverse strand
Band q22.1
Transcripts
ENST00000292566 ENSP00000292566
ENST00000490528 ENSP00000420362
ENST00000498283
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003779 actin binding
GO:0016491 oxidoreductase activity
GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0032451 demethylase activity
GO:0046872 metal ion binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0006482 protein demethylation
GO:0031032 actomyosin structure organization
GO:0036090 cleavage furrow ingression
GO:0055114 oxidation-reduction process
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0030496 midbody
GO:0070938 contractile ring
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000039754
View Gene Order
ENSBTAG00000003617
Not yet available
Cross-References
SwissProt Q9NXW9
TrEMBL
UniProt Splice Variant
Entrez Gene 54784
UniGene Hs.658598
RefSeq NM_017621 XM_005250464 XM_005250465
HUGO HGNC:21900
OMIM 613302
CCDS CCDS5723
HPRD
IMGT
EMBL AC093668 AK000020 AK026097 AK222689 BC002820 BC017096
GenPept AAH02820 AAH17096 BAA90888 BAB15358 BAD96409
RNA Seq Atlas 54784

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca