Version 5.4
Homo sapiens Gene: GPATCH1
Summary
InnateDB Gene IDBG-42465.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol GPATCH1
Gene Name G patch domain containing 1
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000076650
Encoded Proteins
IDBP-42467
G patch domain containing 1
IDBP-760762
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 19:33080880-33130542
Strand Forward strand
Band q13.11
Transcripts
ENST00000170564 ENSP00000170564
ENST00000590062
ENST00000592262
ENST00000592165 ENSP00000467632
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 6 experimentally validated interaction(s) in this database.
Experimentally validated
Total 6 [view]
Protein-Protein 6 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
Biological Process
GO:0000398 mRNA splicing, via spliceosome
Cellular Component
GO:0071013 catalytic step 2 spliceosome
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000063808
View Gene Order
ENSBTAG00000000721
Not yet available
Cross-References
SwissProt
TrEMBL K7EQ19
UniProt Splice Variant
Entrez Gene 55094
UniGene Hs.466436
RefSeq NM_018025 XM_006723255
HUGO HGNC:24658
OMIM
CCDS CCDS12428
HPRD 11008
IMGT
EMBL AC008521
GenPept
RNA Seq Atlas 55094

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca