Version 5.4
Homo sapiens Protein: GPATCH1
Summary
InnateDB Protein IDBP-42467.5
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol GPATCH1
Protein Name G patch domain containing 1
Synonyms
Species Homo sapiens
Ensembl Protein ENSP00000170564
InnateDB Gene IDBG-42465 (GPATCH1)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 6 experimentally validated interaction(s) in this database.
Experimentally validated
Total 6 [view]
Protein-Protein 6 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
Biological Process
GO:0000398 mRNA splicing, via spliceosome
Cellular Component
GO:0071013 catalytic step 2 spliceosome
Protein Structure and Domains
PDB ID
InterPro IPR000467 G-patch domain
IPR011666 Domain of unknown function DUF1604
IPR016187 C-type lectin fold
PFAM PF01585
PF07713
PRINTS
PIRSF
SMART SM00443
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q9BRR8
PhosphoSite PhosphoSite-Q9BRR8
TrEMBL
UniProt Splice Variant
Entrez Gene 55094
UniGene Hs.466436
RefSeq NP_060495
HUGO HGNC:24658
OMIM
CCDS CCDS12428
HPRD 11008
IMGT
EMBL AF434677 AK001068 AL834465 BC006108
GenPept AAH06108 AAN63596 BAA91489 CAD39124

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca