Version 5.4
Homo sapiens Gene: GLIS3
Summary
InnateDB Gene IDBG-45810.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol GLIS3
Gene Name GLIS family zinc finger 3
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000107249
Encoded Proteins
IDBP-45812
GLIS family zinc finger 3
IDBP-45814
GLIS family zinc finger 3
IDBP-477343
GLIS family zinc finger 3
IDBP-476891
GLIS family zinc finger 3
IDBP-479806
GLIS family zinc finger 3
IDBP-473535
GLIS family zinc finger 3
IDBP-479026
GLIS family zinc finger 3
IDBP-474896
GLIS family zinc finger 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene is a member of the GLI-similar zinc finger protein family and encodes a nuclear protein with five C2H2-type zinc finger domains. This protein functions as both a repressor and activator of transcription and is specifically involved in the development of pancreatic beta cells, the thyroid, eye, liver and kidney. Mutations in this gene have been associated with neonatal diabetes and congenital hypothyroidism (NDH). Alternatively spliced variants that encode different protein isoforms have been described but the full-length nature of only two have been determined. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 9:3824127-4348392
Strand Reverse strand
Band p24.2
Transcripts
ENST00000324333 ENSP00000325494
ENST00000381971 ENSP00000371398
ENST00000461870
ENST00000467497
ENST00000463680
ENST00000464391
ENST00000469833
ENST00000490709
ENST00000477901 ENSP00000417794
ENST00000491889 ENSP00000419914
ENST00000478844 ENSP00000418005
ENST00000481827 ENSP00000417883
ENST00000478315 ENSP00000418995
ENST00000473846
ENST00000462164 ENSP00000418671
ENST00000465708
ENST00000471664
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
Experimentally validated
Total 3 [view]
Protein-Protein 3 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001078 RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0003677 DNA binding
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0046872 metal ion binding
Biological Process
GO:0000122 negative regulation of transcription from RNA polymerase II promoter
GO:0006366 transcription from RNA polymerase II promoter
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
Cellular Component
GO:0005634 nucleus
GO:0005794 Golgi apparatus
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000052942
View Gene Order
ENSBTAG00000014467
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.162125 Hs.644570
RefSeq NM_001042413 NM_152629 XM_005251386 XM_005251387 XM_005251388 XM_006716731
HUGO
OMIM
CCDS CCDS43784 CCDS6451
HPRD 13582
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca