Version 5.4
Homo sapiens Gene: RCL1
Summary
InnateDB Gene IDBG-46796.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol RCL1
Gene Name RNA terminal phosphate cyclase-like 1
Synonyms RNAC; RPCL1
Species Homo sapiens
Ensembl Gene ENSG00000120158
Encoded Proteins
IDBP-46798
RNA terminal phosphate cyclase-like 1
IDBP-46800
RNA terminal phosphate cyclase-like 1
IDBP-46802
RNA terminal phosphate cyclase-like 1
IDBP-46804
RNA terminal phosphate cyclase-like 1
IDBP-362045
RNA terminal phosphate cyclase-like 1
IDBP-362053
RNA terminal phosphate cyclase-like 1
IDBP-362059
RNA terminal phosphate cyclase-like 1
IDBP-812520
RNA terminal phosphate cyclase-like 1
IDBP-812523
RNA terminal phosphate cyclase-like 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 9:4792834-4885917
Strand Forward strand
Band p24.1
Transcripts
ENST00000381750 ENSP00000371169
ENST00000381732 ENSP00000371151
ENST00000381730 ENSP00000371149
ENST00000381728 ENSP00000371147
ENST00000442869 ENSP00000412000
ENST00000441844 ENSP00000413381
ENST00000448872 ENSP00000388096
ENST00000473230
ENST00000623584 ENSP00000485623
ENST00000615460 ENSP00000484304
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 8 experimentally validated interaction(s) in this database.
Experimentally validated
Total 8 [view]
Protein-Protein 8 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003824 catalytic activity
Biological Process
GO:0006396 RNA processing
GO:0008150 biological_process
GO:0042254 ribosome biogenesis
Cellular Component
GO:0005730 nucleolus
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000024785
View Gene Order
ENSBTAG00000018667
Not yet available
Cross-References
SwissProt
TrEMBL Q5VZU2
UniProt Splice Variant
Entrez Gene 10171
UniGene Hs.194121 Hs.733204
RefSeq NM_001286699 NM_001286700 NM_001286701 NM_005772 XM_006716715
HUGO HGNC:17687
OMIM 611405
CCDS CCDS6456 CCDS69565 CCDS75810
HPRD 10189
IMGT
EMBL AL158147 AL353151
GenPept
RNA Seq Atlas 10171

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca