Version 5.4
Homo sapiens Gene: AARSD1
Summary
InnateDB Gene IDBG-51971.7
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol AARSD1
Gene Name PTGES3L-AARSD1 readthrough
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000108825
Encoded Proteins
IDBP-51973
alanyl-tRNA synthetase domain containing 1
IDBP-295153
alanyl-tRNA synthetase domain containing 1
IDBP-295148
alanyl-tRNA synthetase domain containing 1
IDBP-379201
alanyl-tRNA synthetase domain containing 1
IDBP-379204
alanyl-tRNA synthetase domain containing 1
IDBP-379206
alanyl-tRNA synthetase domain containing 1
IDBP-379222
alanyl-tRNA synthetase domain containing 1
IDBP-379224
alanyl-tRNA synthetase domain containing 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This locus represents naturally occurring readthrough transcription between the neighboring PTGES3L (prostaglandin E synthase 3 (cytosolic)-like) and AARSD1(alanyl-tRNA synthetase domain containing 1) genes on chromosome 17. The readthrough transcript encodes a fusion protein that shares sequence identity with each individual gene product. [provided by RefSeq, May 2012]
Gene Information
Type Protein coding
Genomic Location Chromosome 17:42950526-42980528
Strand Reverse strand
Band q21.31
Transcripts
ENST00000360221 ENSP00000353355
ENST00000409399 ENSP00000386621
ENST00000409103 ENSP00000386254
ENST00000421990 ENSP00000409924
ENST00000427569 ENSP00000400870
ENST00000423601 ENSP00000393780
ENST00000452752 ENSP00000393019
ENST00000454303 ENSP00000407951
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 39 experimentally validated interaction(s) in this database.
Experimentally validated
Total 39 [view]
Protein-Protein 39 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003674 molecular_function
GO:0003676 nucleic acid binding
GO:0004813 alanine-tRNA ligase activity
GO:0005524 ATP binding
GO:0016876 ligase activity, forming aminoacyl-tRNA and related compounds
GO:0046872 metal ion binding
Biological Process
GO:0006419 alanyl-tRNA aminoacylation
GO:0008150 biological_process
GO:0043039 tRNA aminoacylation
Cellular Component
GO:0005575 cellular_component
GO:0005634 nucleus
GO:0005737 cytoplasm
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000075528
View Gene Order
ENSBTAG00000015136
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.317403
RefSeq NM_001136042 NM_025267 NM_001261434
HUGO
OMIM
CCDS CCDS11447 CCDS45691 CCDS58552
HPRD
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca