Version 5.4
Homo sapiens Gene: CCDC53
Summary
InnateDB Gene IDBG-53498.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol CCDC53
Gene Name coiled-coil domain containing 53
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000120860
Encoded Proteins
IDBP-53500
coiled-coil domain containing 53
IDBP-599383
coiled-coil domain containing 53
IDBP-586067
coiled-coil domain containing 53
IDBP-594045
coiled-coil domain containing 53
IDBP-594334
coiled-coil domain containing 53
IDBP-597445
coiled-coil domain containing 53
IDBP-600355
coiled-coil domain containing 53
IDBP-586448
coiled-coil domain containing 53
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 12:102012927-102062149
Strand Reverse strand
Band q23.2
Transcripts
ENST00000326351
ENST00000240079 ENSP00000240079
ENST00000500685 ENSP00000445501
ENST00000538761 ENSP00000438122
ENST00000544341 ENSP00000440134
ENST00000545679 ENSP00000443857
ENST00000540536 ENSP00000441810
ENST00000535501 ENSP00000440139
ENST00000536197
ENST00000542923 ENSP00000443922
ENST00000539515
ENST00000541569
ENST00000536930
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 25 experimentally validated interaction(s) in this database.
Experimentally validated
Total 25 [view]
Protein-Protein 24 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0008150 biological_process
Cellular Component
GO:0015629 actin cytoskeleton
GO:0043231 intracellular membrane-bounded organelle
GO:0071203 WASH complex
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000020056
View Gene Order
ENSBTAG00000000021
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene
RefSeq NM_001301107 NM_016053 XM_005268939
HUGO
OMIM
CCDS CCDS44959 CCDS73512
HPRD 13031
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca