Version 5.4
Homo sapiens Gene: PARPBP
Summary
InnateDB Gene IDBG-53547.7
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol PARPBP
Gene Name PARP1 binding protein
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000185480
Encoded Proteins
IDBP-53549
chromosome 12 open reading frame 48
IDBP-244692
chromosome 12 open reading frame 48
IDBP-244694
chromosome 12 open reading frame 48
IDBP-382022
chromosome 12 open reading frame 48
IDBP-382024
chromosome 12 open reading frame 48
IDBP-382026
chromosome 12 open reading frame 48
IDBP-600351
chromosome 12 open reading frame 48
IDBP-591873
chromosome 12 open reading frame 48
IDBP-597367
chromosome 12 open reading frame 48
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 12:102120185-102197520
Strand Forward strand
Band q23.2
Transcripts
ENST00000327680 ENSP00000332915
ENST00000392914
ENST00000392911 ENSP00000376643
ENST00000392909 ENSP00000376641
ENST00000412715 ENSP00000393867
ENST00000417507 ENSP00000411313
ENST00000457614 ENSP00000404323
ENST00000541394 ENSP00000440850
ENST00000543784 ENSP00000444576
ENST00000537257 ENSP00000442549
ENST00000541668
ENST00000535811
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0005515 protein binding
Biological Process
GO:0006281 DNA repair
GO:2000042 negative regulation of double-strand break repair via homologous recombination
Cellular Component
GO:0000785 chromatin
GO:0005634 nucleus
GO:0005737 cytoplasm
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000035365
View Gene Order
ENSBTAG00000039709
Not yet available
Cross-References
SwissProt Q9NWS1
TrEMBL
UniProt Splice Variant
Entrez Gene 55010
UniGene Hs.330663
RefSeq NM_017915
HUGO HGNC:26074
OMIM 613687
CCDS CCDS9090
HPRD 07937
IMGT
EMBL AC087882 AK000648 AK303571 BC018903 BC030962 BC050696 BC070270 BC098313 BC099734 BC099844
GenPept AAH18903 AAH30962 AAH50696 AAH70270 AAH98313 AAH99734 AAH99844 BAA91306 BAG64592
RNA Seq Atlas 55010

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca