Version 5.4
Homo sapiens Gene: SH3PXD2B
Summary
InnateDB Gene IDBG-57771.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SH3PXD2B
Gene Name SH3 and PX domains 2B
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000174705
Encoded Proteins
IDBP-57773
SH3 and PX domains 2B
IDBP-474866
SH3 and PX domains 2B
IDBP-477024
SH3 and PX domains 2B
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes an adapter protein that is characterized by a PX domain and four Src homology 3 domains. The encoded protein is required for podosome formation and is involved in cell adhesion and migration of numerous cell types. Mutations in this gene are the cause of Frank-ter Haar syndrome. [provided by RefSeq, Sep 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 5:172325181-172454523
Strand Reverse strand
Band q35.1
Transcripts
ENST00000311601 ENSP00000309714
ENST00000519643 ENSP00000430890
ENST00000523651
ENST00000518522 ENSP00000428076
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 7 experimentally validated interaction(s) in this database.
Experimentally validated
Total 7 [view]
Protein-Protein 6 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 1 [view]
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0010314 phosphatidylinositol-5-phosphate binding
GO:0032266 phosphatidylinositol-3-phosphate binding
GO:0035091 phosphatidylinositol binding
GO:0042169 SH2 domain binding
GO:0070273 phosphatidylinositol-4-phosphate binding
GO:0080025 phosphatidylinositol-3,5-bisphosphate binding
Biological Process
GO:0001501 skeletal system development
GO:0001654 eye development
GO:0006801 superoxide metabolic process
GO:0007507 heart development
GO:0022617 extracellular matrix disassembly
GO:0030154 cell differentiation
GO:0045600 positive regulation of fat cell differentiation
GO:0060348 bone development
GO:0060612 adipose tissue development
GO:0071800 podosome assembly
GO:0072657 protein localization to membrane
Cellular Component
GO:0002102 podosome
GO:0005737 cytoplasm
GO:0030054 cell junction
GO:0042995 cell projection
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000040711
View Gene Order
ENSBTAG00000009019
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.285666 Hs.629010 Hs.734561
RefSeq NM_001017995 XM_005265888
HUGO
OMIM
CCDS CCDS34291
HPRD 18591
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca