Version 5.4
Homo sapiens Gene: GDPD1
Summary
InnateDB Gene IDBG-61648.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol GDPD1
Gene Name glycerophosphodiester phosphodiesterase domain containing 1
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000153982
Encoded Proteins
IDBP-61650
glycerophosphodiester phosphodiesterase domain containing 1
IDBP-763690
IDBP-762708
IDBP-764899
IDBP-757748
IDBP-758411
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes a member of the glycerophosphodiester phosphodiesterase family of enzymes that catalyze the hydrolysis of deacylated glycerophospholipids to glycerol phosphate and alcohol. The encoded protein is localized to the cytoplasm and concentrates near the perinuclear region. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Oct 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome 17:59220467-59275967
Strand Forward strand
Band q22
Transcripts
ENST00000284116 ENSP00000284116
ENST00000579076 ENSP00000464351
ENST00000583543
ENST00000579020 ENSP00000463818
ENST00000578026 ENSP00000462895
ENST00000581140 ENSP00000463273
ENST00000581276 ENSP00000464690
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0008081 phosphoric diester hydrolase activity
GO:0008889 glycerophosphodiester phosphodiesterase activity
GO:0046872 metal ion binding
Biological Process
GO:0006071 glycerol metabolic process
GO:0006629 lipid metabolic process
Cellular Component
GO:0005737 cytoplasm
GO:0016020 membrane
GO:0016021 integral component of membrane
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000061666
View Gene Order
ENSBTAG00000007176
Not yet available
Cross-References
SwissProt Q8N9F7
TrEMBL
UniProt Splice Variant
Entrez Gene 284161
UniGene Hs.631744 Hs.735991
RefSeq NM_001165994 NM_001165993 NM_182569
HUGO HGNC:20883
OMIM
CCDS CCDS58584 CCDS11616 CCDS58583
HPRD 08223
IMGT
EMBL AC091059 AC099850 AK094770 AY271346 BC034432 CH471109 EU192951
GenPept AAH34432 AAQ01751 ABW73991 BAC04419 EAW94412
RNA Seq Atlas 284161

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca