Version 5.4
Bos taurus Gene: SOX13
Summary
InnateDB Gene IDBG-628598.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SOX13
Gene Name Uncharacterized protein
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000008132
Encoded Proteins
IDBP-679967
SRY (sex determining region Y)-box 13
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000143842:
This gene encodes a member of the SOX (SRY-related HMG-box) family of transcription factors involved in the regulation of embryonic development and in the determination of cell fate. The encoded protein may act as a transcriptional regulator after forming a protein complex with other proteins. It has also been determined to be a type-1 diabetes autoantigen, also known as islet cell antibody 12. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 16:1716803-1728817
Strand Forward strand
Band
Transcripts
ENSBTAT00000010692 ENSBTAP00000010692
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0043565 sequence-specific DNA binding
Biological Process
GO:0045586 regulation of gamma-delta T cell differentiation
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000143842
View Gene Order
ENSMUSG00000070643
View Gene Order
Cross-References
SwissProt
TrEMBL E1BL97
UniProt Splice Variant
Entrez Gene 788459
UniGene Bt.105328
RefSeq XM_001255512 XM_002693901 XM_005194748 XM_005194749 XM_005194750 XM_005194751 XM_005194752 XM_005194753 XM_005194754 XM_005216694 XM_005216695 XM_005216696 XM_005216697 XM_005216698 XM_005216699 XM_005216700
HUGO HGNC:11192
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02041911
GenPept
RNA Seq Atlas 788459

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca