Version 5.4
Mus musculus Gene: Sox13
Summary
InnateDB Gene IDBG-192952.5
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Sox13
Gene Name SRY-box containing gene 13
Synonyms AA407916; AW259412; AW540933; Sox-13
Species Mus musculus
Ensembl Gene ENSMUSG00000070643
Encoded Proteins
IDBP-192954
SRY-box containing gene 13
IDBP-542206
SRY-box containing gene 13
IDBP-542705
SRY-box containing gene 13
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000143842:
This gene encodes a member of the SOX (SRY-related HMG-box) family of transcription factors involved in the regulation of embryonic development and in the determination of cell fate. The encoded protein may act as a transcriptional regulator after forming a protein complex with other proteins. It has also been determined to be a type-1 diabetes autoantigen, also known as islet cell antibody 12. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 1:133382303-133424377
Strand Reverse strand
Band E4
Transcripts
ENSMUST00000094551 ENSMUSP00000092130
ENSMUST00000144386 ENSMUSP00000122980
ENSMUST00000153799 ENSMUSP00000119729
ENSMUST00000145922
ENSMUST00000126530
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0043565 sequence-specific DNA binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0045586 regulation of gamma-delta T cell differentiation
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000143842
View Gene Order
ENSBTAG00000008132
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.8575
RefSeq NM_011439 XM_006497266 XM_006497267 XM_006497268 XM_006497269 XM_006497271 XM_006497272 XM_006497273 XM_006497274 XM_006529276 XM_006529277 XM_006529278
OMIM
CCDS CCDS48363
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca