Version 5.4
Bos taurus Gene: ABCA13
Summary
InnateDB Gene IDBG-628807.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol ABCA13
Gene Name Uncharacterized protein
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000003531
Encoded Proteins
IDBP-680219
ATP-binding cassette, sub-family A (ABC1), member 13
IDBP-680221
ATP-binding cassette, sub-family A (ABC1), member 13
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000179869:
In human, the ATP-binding cassette (ABC) family of transmembrane transporters has at least 48 genes and 7 gene subfamilies. This gene is a member of ABC gene subfamily A (ABCA). Genes within the ABCA family typically encode several thousand amino acids. Like other ABC transmembrane transporter proteins, this protein has 12 or more transmembrane alpha-helix domains that likely arrange to form a single central chamber with multiple substrate binding sites. It is also predicted to have two large extracellular domains and two nucleotide binding domains as is typical for ABCA proteins. Alternative splice variants have been described but their biological validity has not been demonstrated.[provided by RefSeq, Mar 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome 4:7096630-7487703
Strand Reverse strand
Band
Transcripts
ENSBTAT00000061018 ENSBTAP00000053807
ENSBTAT00000034269 ENSBTAP00000034167
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0005524 ATP binding
GO:0016887 ATPase activity
GO:0017111 nucleoside-triphosphatase activity
Biological Process
GO:0006200 ATP catabolic process
GO:0008152 metabolic process
Cellular Component
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000179869
View Gene Order
ENSMUSG00000004668
View Gene Order
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
hsa02010
ABC transporters pathway
mmu02010
ABC transporters pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL E1BK38
UniProt Splice Variant
Entrez Gene 100300398
UniGene Bt.111140
RefSeq XM_002686635
HUGO HGNC:14638
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02009718 DAAA02009719 DAAA02009720 DAAA02009721 DAAA02009722 DAAA02009723 DAAA02009724 DAAA02009725 DAAA02009726
GenPept
RNA Seq Atlas 100300398

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca