Version 5.4
Bos taurus Gene: RNF180
Summary
InnateDB Gene IDBG-628820.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol RNF180
Gene Name E3 ubiquitin-protein ligase RNF180
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000043992
Encoded Proteins
IDBP-680196
ring finger protein 180
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000164197:
Gene Information
Type Protein coding
Genomic Location Chromosome 20:15075233-15320360
Strand Reverse strand
Band
Transcripts
ENSBTAT00000061221 ENSBTAP00000053251
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0004842 ubiquitin-protein transferase activity
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0031624 ubiquitin conjugating enzyme binding
GO:0046872 metal ion binding
Biological Process
GO:0000209 protein polyubiquitination
GO:0030534 adult behavior
GO:0031398 positive regulation of protein ubiquitination
GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042415 norepinephrine metabolic process
GO:0042428 serotonin metabolic process
GO:0050790 regulation of catalytic activity
GO:1901360 organic cyclic compound metabolic process
Cellular Component
GO:0031227 intrinsic component of endoplasmic reticulum membrane
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000164197
View Gene Order
ENSMUSG00000021720
View Gene Order
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene
RefSeq
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL
GenPept
RNA Seq Atlas
Transcript Frequencies
Tag Count based mRNA-Abundances across 87 different Tissues (TPM).

Based on Data from Bovine Gene Atlas

Tag Count based mRNA-Abundances across 87 different Tissues (TPM)

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If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca