InnateDB: Systems Biology of the Innate Immune Response

Bos taurus Gene: RBMX

Summary

InnateDB Gene

IDBG-631303.3

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

RBMX

Gene Name

heterogeneous nuclear ribonucleoprotein G

Synonyms

Species

Bos taurus

Ensembl Gene

ENSBTAG00000013308

Encoded Proteins

IDBP-682823

RbmxUncharacterized protein

Protein Structure

Useful resources

Stemformatics EHFPI ImmGen

Entrez Gene

Summary

This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000147274:
This gene belongs to the RBMY gene family which includes candidate Y chromosome spermatogenesis genes. This gene, an active X chromosome homolog of the Y chromosome RBMY gene, is widely expressed whereas the RBMY gene evolved a male-specific function in spermatogenesis. Pseudogenes of this gene, found on chromosomes 1, 4, 9, 11, and 6, were likely derived by retrotransposition from the original gene. Alternatively spliced transcript variants encoding different isoforms have been identified. A snoRNA gene (SNORD61) is found in one of its introns. [provided by RefSeq, Sep 2009] Small nucleolar RNAs (snoRNAs) are small noncoding RNAs involved in RNA processing. Box C/D class snoRNAs are involved in site-specific 2-prime-O-ribose methylation of preribosomal RNA precursors. This snoRNA is located in an intron of the RNA binding motif protein, X-linked gene (RBMX). [provided by RefSeq, Sep 2009]

Gene Information

Type

Protein coding

Genomic Location

Chromosome X:20457677-20462728

Strand

Reverse strand

Band

Transcripts

ENSBTAT00000017696

ENSBTAP00000017696

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 74 interaction(s) predicted by orthology.

Predicted by orthology
Total	74 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0000166	nucleotide binding
GO:0001047	core promoter binding
GO:0003676	nucleic acid binding
GO:0003682	chromatin binding
GO:0003723	RNA binding
GO:0003729	mRNA binding
GO:0005515	protein binding
GO:0044822	poly(A) RNA binding

Biological Process

GO:0000381	regulation of alternative mRNA splicing, via spliceosome
GO:0001649	osteoblast differentiation
GO:0006366	transcription from RNA polymerase II promoter
GO:0006509	membrane protein ectodomain proteolysis
GO:0045944	positive regulation of transcription from RNA polymerase II promoter
GO:0071347	cellular response to interleukin-1

Cellular Component

GO:0005615	extracellular space
GO:0005634	nucleus
GO:0005719	nuclear euchromatin
GO:0016020	membrane
GO:0044530	supraspliceosomal complex
GO:0070062	extracellular vesicular exosome
GO:0071013	catalytic step 2 spliceosome