Version 5.4
Bos taurus Gene: AFF2
Summary
InnateDB Gene IDBG-631699.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol AFF2
Gene Name AF4/FMR2 family member 2
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000020750
Encoded Proteins
IDBP-683276
AF4/FMR2 family, member 2
IDBP-683280
AF4/FMR2 family, member 2
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000155966:
This gene encodes a putative transcriptional activator that is a member of the AF4\FMR2 gene family. This gene is associated with the folate-sensitive fragile X E locus on chromosome X. A repeat polymorphism in the fragile X E locus results in silencing of this gene causing Fragile X E syndrome. Fragile X E syndrome is a form of nonsyndromic X-linked mental retardation. Alternate splicing results in multiple transcript variants.[provided by RefSeq, Dec 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome X:31424252-31964101
Strand Forward strand
Band
Transcripts
ENSBTAT00000061034 ENSBTAP00000053415
ENSBTAT00000027656 ENSBTAP00000027656
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 5 interaction(s) predicted by orthology.
Predicted by orthology
Total 5 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0002151 G-quadruplex RNA binding
Biological Process
GO:0007611 learning or memory
GO:0043484 regulation of RNA splicing
Cellular Component
GO:0016607 nuclear speck
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000155966
View Gene Order
ENSMUSG00000031189
View Gene Order
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Bt.108987 Bt.7816 Bt.90455
RefSeq NM_001191543 XM_005227590 XM_005227591 XM_005227592
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca