Version 5.4
Bos taurus Gene: ABCB9
Summary
InnateDB Gene IDBG-632445.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol ABCB9
Gene Name ATP-binding cassette sub-family B member 9
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000008464
Encoded Proteins
IDBP-684055
ATP-binding cassette, sub-family B (MDR/TAP), member 9
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000150967:
The membrane-associated protein encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various molecules across extra- and intra-cellular membranes. ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20, White). This protein is a member of the MDR/TAP subfamily. Members of the MDR/TAP subfamily are involved in multidrug resistance as well as antigen presentation. This family member functions in the translocation of peptides from the cytosol into the lysosomal lumen. Alternative splicing of this gene results in distinct isoforms which are likely to have different substrate specificities. [provided by RefSeq, Jul 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome 17:54827286-54851000
Strand Forward strand
Band
Transcripts
ENSBTAT00000011137 ENSBTAP00000011137
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0015440 peptide-transporting ATPase activity
GO:0016887 ATPase activity
GO:0017111 nucleoside-triphosphatase activity
GO:0022891 substrate-specific transmembrane transporter activity
GO:0042626 ATPase activity, coupled to transmembrane movement of substances
GO:0042803 protein homodimerization activity
Biological Process
GO:0006200 ATP catabolic process
GO:0006810 transport
GO:0008152 metabolic process
GO:0015833 peptide transport
GO:0055085 transmembrane transport
Cellular Component
GO:0005764 lysosome
GO:0005765 lysosomal membrane
GO:0016021 integral component of membrane
GO:0030176 integral component of endoplasmic reticulum membrane
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000150967
View Gene Order
ENSMUSG00000029408
View Gene Order
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
hsa02010
ABC transporters pathway
hsa04142
Lysosome pathway
mmu02010
ABC transporters pathway
mmu04142
Lysosome pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL E1BKR0
UniProt Splice Variant
Entrez Gene 529923
UniGene Bt.77422
RefSeq NM_001191355
HUGO HGNC:50
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02045240 DAAA02045241
GenPept
RNA Seq Atlas 529923

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca