Version 5.4
Bos taurus Gene: CELF3
Summary
InnateDB Gene IDBG-633046.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol CELF3
Gene Name CUGBP Elav-like family member 3
Synonyms TNRC4
Species Bos taurus
Ensembl Gene ENSBTAG00000019131
Encoded Proteins
IDBP-684718
CUGBP Elav-like family member 3
IDBP-684721
CUGBP Elav-like family member 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000159409:
Members of the CELF/BRUNOL protein family contain two N-terminal RNA recognition motif (RRM) domains, one C-terminal RRM domain, and a divergent segment of 160-230 aa between the second and third RRM domains. Members of this protein family regulate pre-mRNA alternative splicing and may also be involved in mRNA editing, and translation. Multiple alternatively spliced transcript variants encoding different isoforms have been identified in this gene. [provided by RefSeq, Feb 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 3:19105094-19119703
Strand Forward strand
Band
Transcripts
ENSBTAT00000056432 ENSBTAP00000052117
ENSBTAT00000033848 ENSBTAP00000033756
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 6 interaction(s) predicted by orthology.
Predicted by orthology
Total 6 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
Biological Process
GO:0000381 regulation of alternative mRNA splicing, via spliceosome
GO:0006397 mRNA processing
GO:0007283 spermatogenesis
GO:0008380 RNA splicing
GO:0030317 sperm motility
GO:0048026 positive regulation of mRNA splicing, via spliceosome
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000159409
View Gene Order
ENSMUSG00000028137
View Gene Order
Cross-References
SwissProt
TrEMBL A1L544
UniProt Splice Variant
Entrez Gene 513347
UniGene Bt.18201 Bt.70446
RefSeq NM_001076845 XM_005203879 XM_005203880 XM_005203881 XM_005203884 XM_005203885 XM_005203886 XM_005203887
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL BT029831 DAAA02007247
GenPept ABM21547
RNA Seq Atlas 513347

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca