Version 5.4
Bos taurus Gene: HMGN5
Summary
InnateDB Gene IDBG-634960.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol HMGN5
Gene Name Uncharacterized protein
Synonyms NSBP1
Species Bos taurus
Ensembl Gene ENSBTAG00000001877
Encoded Proteins
IDBP-686778
high mobility group nucleosome binding domain 5
IDBP-686781
high mobility group nucleosome binding domain 5
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000198157:
This gene encodes a nuclear protein with similarities to the high mobility group proteins, HMG14 and HMG17, which suggests that this protein may function as a nucleosomal binding and transcriptional activating protein. [provided by RefSeq, Sep 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome X:70619741-70628828
Strand Forward strand
Band
Transcripts
ENSBTAT00000002444 ENSBTAP00000002444
ENSBTAT00000053474 ENSBTAP00000051689
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003682 chromatin binding
GO:0031492 nucleosomal DNA binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006357 regulation of transcription from RNA polymerase II promoter
Cellular Component
GO:0000785 chromatin
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005730 nucleolus
GO:0043231 intracellular membrane-bounded organelle
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000198157
View Gene Order
ENSMUSG00000031245
View Gene Order
Cross-References
SwissProt
TrEMBL F1N4I5
UniProt Splice Variant
Entrez Gene 767875
UniGene Bt.102713
RefSeq XM_002699936 XM_003584311
HUGO HGNC:8013
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02072241
GenPept
RNA Seq Atlas 767875

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca