Version 5.4
Bos taurus Gene: OPN1SW
Summary
InnateDB Gene IDBG-635096.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol OPN1SW
Gene Name Short-wave-sensitive opsin 1
Synonyms BCP
Species Bos taurus
Ensembl Gene ENSBTAG00000016485
Encoded Proteins
IDBP-686900
Short-wave-sensitive opsin 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000128617:
This gene belongs to the G-protein coupled receptor 1 family, opsin subfamily. It encodes the blue cone pigment gene which is one of three types of cone photoreceptors responsible for normal color vision. Defects in this gene are the cause of tritan color blindness (tritanopia). Affected individuals lack blue and yellow sensory mechanisms while retaining those for red and green. Defective blue vision is characteristic. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 4:93557351-93560340
Strand Reverse strand
Band
Transcripts
ENSBTAT00000021912 ENSBTAP00000021912
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
GO:0004871 signal transducer activity
GO:0004930 G-protein coupled receptor activity
GO:0009881 photoreceptor activity
Biological Process
GO:0007165 signal transduction
GO:0007186 G-protein coupled receptor signaling pathway
GO:0007601 visual perception
GO:0007602 phototransduction
GO:0018298 protein-chromophore linkage
GO:0050896 response to stimulus
Cellular Component
GO:0001750 photoreceptor outer segment
GO:0016020 membrane
GO:0016021 integral component of membrane
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000128617
View Gene Order
ENSMUSG00000058831
View Gene Order
Pathways
NETPATH
REACTOME
REACT_205369
Signaling by GPCR pathway
REACT_203536
Opsins pathway
REACT_223698
Visual phototransduction pathway
REACT_210568
G alpha (i) signalling events pathway
REACT_214353
Signal Transduction pathway
REACT_216038
Diseases associated with visual transduction pathway
REACT_214436
GPCR downstream signaling pathway
REACT_220217
GPCR ligand binding pathway
REACT_208412
Class A/1 (Rhodopsin-like receptors) pathway
REACT_218434
Retinoid cycle disease events pathway
REACT_207087
Disease pathway
REACT_223349
The retinoid cycle in cones (daylight vision) pathway
KEGG
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_19231
G alpha (i) signalling events pathway
REACT_18426
Opsins pathway
REACT_14828
Class A/1 (Rhodopsin-like receptors) pathway
REACT_160083
The retinoid cycle in cones (daylight vision) pathway
REACT_160130
Retinoid cycle disease events pathway
REACT_14797
Signaling by GPCR pathway
REACT_111102
Signal Transduction pathway
REACT_19184
GPCR downstream signaling pathway
REACT_160102
Diseases associated with visual transduction pathway
REACT_160125
Visual phototransduction pathway
REACT_21340
GPCR ligand binding pathway
REACT_116125
Disease pathway
REACT_223625
GPCR downstream signaling pathway
REACT_189085
Disease pathway
REACT_254215
Signaling by GPCR pathway
REACT_261161
Class A/1 (Rhodopsin-like receptors) pathway
REACT_245980
Opsins pathway
REACT_231468
GPCR ligand binding pathway
REACT_250376
G alpha (i) signalling events pathway
REACT_188260
Visual phototransduction pathway
REACT_196615
Retinoid cycle disease events pathway
REACT_196617
The retinoid cycle in cones (daylight vision) pathway
REACT_188257
Signal Transduction pathway
REACT_188255
Diseases associated with visual transduction pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt P51490
TrEMBL
UniProt Splice Variant
Entrez Gene 282294
UniGene Bt.585
RefSeq NM_174567
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL U49760 U49761 U49762 U49763 U49764 U92557
GenPept AAA93189 AAB50158
RNA Seq Atlas 282294

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca