Version 5.4
Bos taurus Gene: USP13
Summary
InnateDB Gene IDBG-635972.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol USP13
Gene Name Ubiquitin carboxyl-terminal hydrolase 13
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000005946
Encoded Proteins
IDBP-687859
ubiquitin specific peptidase 13 (isopeptidase T-3)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000058056:
Gene Information
Type Protein coding
Genomic Location Chromosome 1:87949654-88075267
Strand Reverse strand
Band
Transcripts
ENSBTAT00000061390 ENSBTAP00000053221
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 33 interaction(s) predicted by orthology.
Predicted by orthology
Total 33 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0004197 cysteine-type endopeptidase activity
GO:0004221 ubiquitin thiolesterase activity
GO:0004843 ubiquitin-specific protease activity
GO:0005515 protein binding
GO:0008233 peptidase activity
GO:0008234 cysteine-type peptidase activity
GO:0008242 omega peptidase activity
GO:0008270 zinc ion binding
GO:0016787 hydrolase activity
GO:0031625 ubiquitin protein ligase binding
GO:0036459 ubiquitinyl hydrolase activity
GO:0043130 ubiquitin binding
GO:0046872 metal ion binding
Biological Process
GO:0006355 regulation of transcription, DNA-templated
GO:0006508 proteolysis
GO:0006511 ubiquitin-dependent protein catabolic process
GO:0006914 autophagy
GO:0008283 cell proliferation
GO:0010506 regulation of autophagy
GO:0050821 protein stabilization
GO:0070536 protein K63-linked deubiquitination
Cellular Component
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000058056
View Gene Order
ENSMUSG00000056900
View Gene Order
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Bt.74584
RefSeq NM_001191266
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca