Version 5.4
Bos taurus Gene: APOF
Summary
InnateDB Gene IDBG-635992.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol APOF
Gene Name apolipoprotein F precursor
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000004384
Encoded Proteins
IDBP-687875
apolipoprotein F
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000175336:
The product of this gene is one of the minor apolipoproteins found in plasma. This protein forms complexes with lipoproteins and may be involved in transport and/or esterification of cholesterol. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 5:57303355-57318372
Strand Forward strand
Band
Transcripts
ENSBTAT00000005751 ENSBTAP00000005751
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
Biological Process
GO:0006641 triglyceride metabolic process
GO:0008203 cholesterol metabolic process
GO:0033344 cholesterol efflux
Cellular Component
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000175336
View Gene Order
ENSMUSG00000047631
View Gene Order
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_6934
LDL-mediated lipid transport pathway
REACT_15518
Transmembrane transport of small molecules pathway
REACT_22258
Metabolism of lipids and lipoproteins pathway
REACT_267716
Orphan transporters pathway
REACT_6823
Lipoprotein metabolism pathway
REACT_111217
Metabolism pathway
REACT_602
Lipid digestion, mobilization, and transport pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL Q17QH1
UniProt Splice Variant
Entrez Gene 539595
UniGene Bt.92812
RefSeq NM_001128502 XM_005206659 XM_005206660
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL BC118363 DAAA02013529
GenPept AAI18364
RNA Seq Atlas 539595

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca