Version 5.4
Bos taurus Gene: PRPF38A
Summary
InnateDB Gene IDBG-639353.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol PRPF38A
Gene Name Pre-mRNA-splicing factor 38A
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000002720
Encoded Proteins
IDBP-691502
Pre-mRNA-splicing factor 38A
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000134748:
Gene Information
Type Protein coding
Genomic Location Chromosome 3:94516357-94537949
Strand Reverse strand
Band
Transcripts
ENSBTAT00000003524 ENSBTAP00000003524
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 15 interaction(s) predicted by orthology.
Predicted by orthology
Total 15 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006397 mRNA processing
GO:0008380 RNA splicing
Cellular Component
GO:0005634 nucleus
GO:0005681 spliceosomal complex
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000134748
View Gene Order
ENSMUSG00000063800
View Gene Order
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
hsa03040
Spliceosome pathway
mmu03040
Spliceosome pathway
INOH
PID NCI
Cross-References
SwissProt Q0P5I6
TrEMBL
UniProt Splice Variant
Entrez Gene 507240
UniGene Bt.101665 Bt.18521 Bt.93525
RefSeq NM_001075307
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL BC119992
GenPept AAI19993
RNA Seq Atlas 507240

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca