Version 5.4
Bos taurus Protein: PRPF38A
Summary
InnateDB Protein IDBP-691502.2
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol PRPF38A
Protein Name Pre-mRNA-splicing factor 38A
Synonyms
Species Bos taurus
Ensembl Protein ENSBTAP00000003524
InnateDB Gene IDBG-639353 (PRPF38A)
Protein Structure
UniProt Annotation
Function May be required for pre-mRNA splicing. {ECO:0000305}.
Subcellular Localization Nucleus {ECO:0000305}.
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 15 interaction(s) predicted by orthology.
Predicted by orthology
Total 15 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006397 mRNA processing
GO:0008380 RNA splicing
Cellular Component
GO:0005634 nucleus
GO:0005681 spliceosomal complex
Protein Structure and Domains
PDB ID
InterPro IPR005037 Pre-mRNA-splicing factor 38
PFAM PF03371
PRINTS
PIRSF
SMART
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q0P5I6
PhosphoSite PhosphoSite-
TrEMBL
UniProt Splice Variant
Entrez Gene 507240
UniGene Bt.93525
RefSeq NP_001068775
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL BC119992
GenPept AAI19993

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca