Version 5.4
Bos taurus Gene: COL22A1
Summary
InnateDB Gene IDBG-644006.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol COL22A1
Gene Name Uncharacterized protein
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000015374
Encoded Proteins
IDBP-696635
collagen, type XXII, alpha 1
IDBP-696637
collagen, type XXII, alpha 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000169436:
COL22A1, a member of the FACIT (fibrillar-associated collagens with interrupted triple helices) subgroup of the collagen protein family, specifically localizes to tissue junctions (Koch et al., 2004 [PubMed 15016833]).[supplied by OMIM, Mar 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 14:5154763-5353760
Strand Forward strand
Band
Transcripts
ENSBTAT00000031507 ENSBTAP00000031460
ENSBTAT00000065866 ENSBTAP00000054210
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000169436
View Gene Order
ENSMUSG00000079022
View Gene Order
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_121139
Collagen biosynthesis and modifying enzymes pathway
REACT_118779
Extracellular matrix organization pathway
REACT_120729
Collagen formation pathway
KEGG
hsa04974
Protein digestion and absorption pathway
mmu04974
Protein digestion and absorption pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL E1BG60
UniProt Splice Variant
Entrez Gene 521058
UniGene
RefSeq
HUGO HGNC:22989
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02037547
GenPept
RNA Seq Atlas 521058

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca