Version 5.4
Bos taurus Gene: BT.76198
Summary
InnateDB Gene IDBG-645638.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol BT.76198
Gene Name WD repeat-containing protein 82
Synonyms PTK9L; WDR82P1
Species Bos taurus
Ensembl Gene ENSBTAG00000002960
Encoded Proteins
IDBP-698376
WD repeat-containing protein 82
IDBP-698402
WD repeat-containing protein 82
IDBP-698404
WD repeat-containing protein 82
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000164091:
TMEM113 (WDR82) is a component of the mammalian SET1A (MIM 611052)/SET1B (MIM 611055) histone H3-Lys4 methyltransferase complexes (Lee and Skalnik, 2005 [PubMed 16253997]; Lee et al., 2007 [PubMed 17355966]).[supplied by OMIM, Jul 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 22:49182445-49227366
Strand Forward strand
Band
Transcripts
ENSBTAT00000003855 ENSBTAP00000003855
ENSBTAT00000045850 ENSBTAP00000043205
ENSBTAT00000024225 ENSBTAP00000024225
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 36 interaction(s) predicted by orthology.
Predicted by orthology
Total 36 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003682 chromatin binding
GO:0003779 actin binding
GO:0005515 protein binding
GO:0042800 histone methyltransferase activity (H3-K4 specific)
Biological Process
GO:0030837 negative regulation of actin filament polymerization
GO:0051568 histone H3-K4 methylation
Cellular Component
GO:0000785 chromatin
GO:0005622 intracellular
GO:0005634 nucleus
GO:0035097 histone methyltransferase complex
GO:0048188 Set1C/COMPASS complex
GO:0072357 PTW/PP1 phosphatase complex
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000164091
View Gene Order
ENSMUSG00000020257
View Gene Order
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
hsa03015
mRNA surveillance pathway pathway
mmu03015
mRNA surveillance pathway pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL A7Z085
UniProt Splice Variant
Entrez Gene 783336
UniGene Bt.4261 Bt.76198
RefSeq NM_001105459 XM_005217591 NM_001105324
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL BC153287 DAAA02054383 DAAA02054384
GenPept AAI53288
RNA Seq Atlas 282024 781318 783336

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca