Version 5.4
Homo sapiens Gene: WDR82
Summary
InnateDB Gene IDBG-38540.5
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol WDR82
Gene Name WD repeat domain 82
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000164091
Encoded Proteins
IDBP-38542
WD repeat domain 82
IDBP-484848
WD repeat domain 82
IDBP-475359
WD repeat domain 82
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary TMEM113 (WDR82) is a component of the mammalian SET1A (MIM 611052)/SET1B (MIM 611055) histone H3-Lys4 methyltransferase complexes (Lee and Skalnik, 2005 [PubMed 16253997]; Lee et al., 2007 [PubMed 17355966]).[supplied by OMIM, Jul 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 3:52254421-52288020
Strand Reverse strand
Band p21.2
Transcripts
ENST00000296490 ENSP00000296490
ENST00000487402
ENST00000469000 ENSP00000420779
ENST00000463624 ENSP00000417313
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 62 experimentally validated interaction(s) in this database.
Experimentally validated
Total 62 [view]
Protein-Protein 62 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003682 chromatin binding
GO:0005515 protein binding
GO:0042800 histone methyltransferase activity (H3-K4 specific)
Biological Process
GO:0051568 histone H3-K4 methylation
Cellular Component
GO:0000785 chromatin
GO:0005634 nucleus
GO:0035097 histone methyltransferase complex
GO:0048188 Set1C/COMPASS complex
GO:0072357 PTW/PP1 phosphatase complex
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000020257
View Gene Order
ENSBTAG00000002960
Not yet available
Pathways
NETPATH
REACTOME
KEGG
hsa03015
mRNA surveillance pathway pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.194110 Hs.602680 Hs.619193 Hs.717997
RefSeq NM_025222
HUGO
OMIM
CCDS CCDS2851
HPRD 15183
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca