Version 5.4
Bos taurus Gene: SPE39
Summary
InnateDB Gene IDBG-646897.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SPE39
Gene Name Spermatogenesis-defective protein 39 homolog
Synonyms C10H14orf133; SPE-39; SPE39; VIPAR
Species Bos taurus
Ensembl Gene ENSBTAG00000020475
Encoded Proteins
IDBP-699742
VPS33B-interacting protein
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000151445:
This gene encodes a protein involved in the sorting of lysosomal proteins. Mutations in this gene are associated with ARCS2 (arthrogryposis, renal dysfunction, and cholestasis-2). Alternative splicing results in multiple transcript variants.[provided by RefSeq, Jul 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 10:89688362-89715193
Strand Reverse strand
Band
Transcripts
ENSBTAT00000027283 ENSBTAP00000027283
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 11 interaction(s) predicted by orthology.
Predicted by orthology
Total 11 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0006810 transport
GO:0006886 intracellular protein transport
GO:0007283 spermatogenesis
GO:0008333 endosome to lysosome transport
GO:0015031 protein transport
GO:0030154 cell differentiation
Cellular Component
GO:0005737 cytoplasm
GO:0005768 endosome
GO:0005769 early endosome
GO:0005770 late endosome
GO:0016023 cytoplasmic membrane-bounded vesicle
GO:0030897 HOPS complex
GO:0031410 cytoplasmic vesicle
GO:0055037 recycling endosome
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000151445
View Gene Order
ENSMUSG00000021038
View Gene Order
Cross-References
SwissProt A5D796
TrEMBL
UniProt Splice Variant
Entrez Gene 508872
UniGene Bt.57741
RefSeq NM_001098000
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL BC140476
GenPept AAI40477
RNA Seq Atlas 508872

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca