Version 5.4
Bos taurus Gene: RTL1
Summary
InnateDB Gene IDBG-647906.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol RTL1
Gene Name bta-mir-433
Synonyms PEG11
Species Bos taurus
Ensembl Gene ENSBTAG00000046585
Encoded Proteins
IDBP-700692
Retrotransposon-like protein 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000254656:
This gene is a retrotransposon-derived, paternally expressed imprinted gene that is highly expressed at the late fetal stage in both the fetus and placenta. It has an overlapping maternally expressed antisense transcript, which contains several microRNAs targeting the transcripts of this gene through an RNA interference (RNAi) mechanism. This gene is essential for maintenance of the fetal capillaries. [provided by RefSeq, Jul 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome 21:67427514-67431509
Strand Reverse strand
Band
Transcripts
ENSBTAT00000065107 ENSBTAP00000055386
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
Biological Process
GO:0007275 multicellular organismal development
Cellular Component
GO:0016020 membrane
GO:0016021 integral component of membrane
Orthologs
Species
Mus musculus
Homo sapiens
Gene ID
Gene Order
ENSMUSG00000085925
View Gene Order
ENSG00000254656
View Gene Order
Cross-References
SwissProt Q52QI2
TrEMBL
UniProt Splice Variant
Entrez Gene 606737
UniGene Bt.45019
RefSeq NM_001195020
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL AAFC03050876 AY986480
GenPept AAX84834
RNA Seq Atlas 606737
Transcript Frequencies
Tag Count based mRNA-Abundances across 87 different Tissues (TPM).

Based on Data from Bovine Gene Atlas

Tag Count based mRNA-Abundances across 87 different Tissues (TPM)

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If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca