Version 5.4
Mus musculus Gene: Rtl1
Summary
InnateDB Gene IDBG-488855.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rtl1
Gene Name retrotransposon-like 1
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000085925
Encoded Proteins
IDBP-540862
retrotransposon-like 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000254656:
This gene is a retrotransposon-derived, paternally expressed imprinted gene that is highly expressed at the late fetal stage in both the fetus and placenta. It has an overlapping maternally expressed antisense transcript, which contains several microRNAs targeting the transcripts of this gene through an RNA interference (RNAi) mechanism. This gene is essential for maintenance of the fetal capillaries. [provided by RefSeq, Jul 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome 12:109589194-109600330
Strand Reverse strand
Band F1
Transcripts
ENSMUST00000149046 ENSMUSP00000115957
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
Biological Process
GO:0007275 multicellular organismal development
Cellular Component
GO:0016021 integral component of membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000254656
View Gene Order
ENSBTAG00000046585
Not yet available
Cross-References
SwissProt Q7M732
TrEMBL B4YB44
UniProt Splice Variant
Entrez Gene 353326
UniGene Mm.23062 Mm.390532 Mm.490311
RefSeq NM_184109
OMIM
CCDS CCDS26170
HPRD
IMGT
MGI ID MGI:2656842
MGI Symbol Rtl1
EMBL AC152063 BK001261 EU434913 EU434918
GenPept ACF20046 ACF20051 DAA01153
RNA Seq Atlas 353326

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca