Version 5.4
Homo sapiens Gene: ANKRD42
Summary
InnateDB Gene IDBG-66282.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol ANKRD42
Gene Name ankyrin repeat domain 42
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000137494
Encoded Proteins
IDBP-66286
ankyrin repeat domain 42
IDBP-243716
ankyrin repeat domain 42
IDBP-243718
ankyrin repeat domain 42
IDBP-583417
ankyrin repeat domain 42
IDBP-586732
ankyrin repeat domain 42
IDBP-597626
ankyrin repeat domain 42
IDBP-586257
ankyrin repeat domain 42
IDBP-602230
ankyrin repeat domain 42
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 11:83193739-83260694
Strand Forward strand
Band q14.1
Transcripts
ENST00000260047 ENSP00000260047
ENST00000393392 ENSP00000377051
ENST00000393389 ENSP00000377049
ENST00000528722 ENSP00000432375
ENST00000526731 ENSP00000433585
ENST00000531895 ENSP00000434666
ENST00000533342 ENSP00000435790
ENST00000531815 ENSP00000435197
ENST00000528190
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0051059 NF-kappaB binding
Biological Process
GO:0006412 translation
GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity
GO:0051092 positive regulation of NF-kappaB transcription factor activity
GO:1900017 positive regulation of cytokine production involved in inflammatory response
Cellular Component
GO:0005634 nucleus
GO:0005840 ribosome
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000041343
View Gene Order
ENSBTAG00000001391
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.503438
RefSeq NM_001300972 NM_001300973 NM_001300976 NM_001300977 NM_182603 XM_005273971 XM_005273972
HUGO
OMIM
CCDS CCDS73355 CCDS73356 CCDS8265
HPRD 08230
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca