Version 5.4
Mus musculus Gene: Ankrd42
Summary
InnateDB Gene IDBG-199036.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Ankrd42
Gene Name ankyrin repeat domain 42
Synonyms 4931426M20; 4933417L02Rik; Ikbn
Species Mus musculus
Ensembl Gene ENSMUSG00000041343
Encoded Proteins
IDBP-199038
ankyrin repeat domain 42
IDBP-400449
ankyrin repeat domain 42
IDBP-535128
ankyrin repeat domain 42
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000137494:
Gene Information
Type Protein coding
Genomic Location Chromosome 7:92581723-92637142
Strand Reverse strand
Band E1
Transcripts
ENSMUST00000056106 ENSMUSP00000061208
ENSMUST00000118157 ENSMUSP00000113767
ENSMUST00000126305 ENSMUSP00000123315
ENSMUST00000138215
ENSMUST00000142971
ENSMUST00000138267
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 1 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0051059 NF-kappaB binding
Biological Process
GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity
GO:0051092 positive regulation of NF-kappaB transcription factor activity
GO:1900017 positive regulation of cytokine production involved in inflammatory response
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000137494
View Gene Order
ENSBTAG00000001391
Not yet available
Cross-References
SwissProt
TrEMBL D6RCX7
UniProt Splice Variant
Entrez Gene 73845
UniGene Mm.73248
RefSeq NM_028665
OMIM
CCDS CCDS52310
HPRD
IMGT
MGI ID MGI:1921095
MGI Symbol Ankrd42
EMBL AC104921 AC158144
GenPept
RNA Seq Atlas 73845

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca